In this study, measurements and numerical analyses of the temperature distribution of exhaust gas passing through two types of mixers using a micro turbojet engine were performed to investigate the flow mixing performance based on the shape of the mixer, which mixes the bypass air and core air in a gas turbine turbofan engine. To study the mixing characteristics of the mixer, compressed air was supplied through an external duct mounted on a micro turbojet engine to simulate bypass flow, and a system in which hot gas and compressed air were mixed and ejected into the atmosphere was fabricated. A confluent-type mixer and a mixer with 8-lobed mixer channels in the form of a sine wave were used for the experiment. The exhaust gas temperature was measured based on the distance from the nozzle outlet at bypass ratios of 0.5, 1.0 and 1.4. The results showed that the lobed mixer is more effective than the confluent mixer in lowering the exhaust gas temperature as the bypass ratio increased. Numerical analysis results indicated that, in the case of the confluent mixer, flow mixing is primarily performed by shear flow owing to the velocity difference between the core gas and the bypass air. In contrast, in the case of a lobed mixer, flow mixing is achieved through rotational motion and transverse flow. In addition, when the number of lobe channels increased from 8 to 12, the rotational motion increased and the mixing performance improved. Furthermore, infrared signal calculation results confirmed that, as the number of lobe channels increased, improved flow mixing effectively reduced the infrared signal. We conclude that this study helps understand the mixing characteristics of the flow according to the shape of the mixer at various bypass ratios and determine their effect on the characteristics of the infrared signal.