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Chapter 5 - DNA Is Not the Whole Story: Transgenerational Epigenesis and Imprinting

Published online by Cambridge University Press:  15 December 2022

By
Ashwini Balakrishnan  and
J. Richard Chaillet
Edited by
Stéphane Viville  and
Karen D. Sermon
Stéphane Viville
Affiliation:
Laboratoire de Génétique Médicale de Strasbourg and Laboratoire de diagnostic génétique, Strasbourg
Karen D. Sermon
Affiliation:
Reproduction and Genetics Research Group, Vrije Universiteit Brussel
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Summary

There are two types of genomic information accurately inherited or maintained following DNA replication: the entire genomic DNA sequence and epigenetic information in the form of patterns of CpG methylation on a subset of the genome. These DNA methylation patterns are crucially important for mammalian development, primarily because they regulate gene transcription. There are cyclical declines and increases in DNA methylation during gametogenesis and embryogenesis, and the oscillations in methylation occurring across generations must depend on de novo methylation and demethylation processes to rearrange the existing methylation patterns. Within any single reproductive cycle, changes in genomic methylation are the outcome of a linked sequence of active and passive processes that rearrange genomic methylation to generate epigenetic milestones, each with a defined future role. For example, genomic imprints are established during gametogenesis by de novo methylation to generate mature gametes with complete complements of paternal methylation imprints in sperm and maternal methylation imprints in oocytes. The establishment of a collective set of imprints within a sperm and an oocyte is an epigenetic milestone, whose purpose after sperm–oocyte fusion is to ensure monoallelic expression of imprinted genes during fetal development. We postulate that another essential epigenetic milestone is found in the blastocyst-stage embryo; this milestone is achieved at the generation, through the poorly understood process of epigenetic reprogramming, of pluripotent embryo stem cells, whose role is to contribute to the development of the conceptus. Primordial germ cells (PGCs), largely devoid of genomic methylation and poised to differentiate into gametes with sex-specific imprints, and adult stem cells, poised to differentiate into organs, would be other possible epigenetic milestones. The developmental locations of three fundamental milestones (gametes, blastocyst, and PGCs), and the epigenetic processes by which they are crafted, are depicted in Figure 5.1.

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Textbook of Human Reproductive Genetics , pp. 68 - 82
Publisher: Cambridge University Press
Print publication year: 2023

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