Throughout the Pleistocene, valley glaciers repeatedly advanced into the forelands of the European Alps. However, the corresponding geological record is highly fragmentary and the regional glaciation history, especially prior to the last glacial maximum, is still poorly documented. We explored the archives of the Lower Aare Valley in the confluence area of the Aare river with Reuss and Limmat, focusing on the overdeepened Gebenstorf-Stilli Trough. In four scientific boreholes, ∼350 m of drill cores were recovered, and complemented with investigations of outcrops and reflection seismics in the nearby glaciofluvial Habsburg-Rinikerfeld Palaeochannel. The integrative interpretation of these data provides new insights into the local landscape evolution: We identified two generations of glacial basin infill in the Gebenstorf-Stilli Trough that are overlain by glaciofluvial gravels, and two distinct glaciofluvial gravel bodies in the neighboring paleochannel. In this specific local setting, gravel petrographic compositions and their statistical analysis prove to be powerful tools to identify inputs from the confluent catchments, to aid in lithostratigraphic classification, and to interpret the depositional and landscape histories. We suggest that it is mainly the penultimate glaciation, characterized by three separate ice advances, that shaped the present-day study area, and whose deposits are preserved in the Middle Pleistocene archives.