Hostname: page-component-745bb68f8f-lrblm Total loading time: 0 Render date: 2025-02-11T13:40:25.224Z Has data issue: false hasContentIssue false

Sympatric western lowland gorillas, central chimpanzees and humans are infected with different trichomonads

Published online by Cambridge University Press:  07 October 2019

K. J. Petrželková
Affiliation:
The Czech Academy of Sciences, Institute of Vertebrate Biology, Květná 8, 603 65Brno, Czech Republic The Czech Academy of Sciences, Biology Centre, Institute of Parasitology, Branišovská 31, 370 05České Budějovice, Czech Republic Liberec Zoo, Lidové sady 425/1, 460 01Liberec, Czech Republic
P. Smejkalová
Affiliation:
Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 44Prague, Czech Republic Department of Parasitology, Faculty of Science, Charles University, Viničná 7, 128 44Prague, Czech Republic
V. Céza
Affiliation:
Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 44Prague, Czech Republic
B. Pafčo
Affiliation:
The Czech Academy of Sciences, Institute of Vertebrate Biology, Květná 8, 603 65Brno, Czech Republic
K. A. Shutt-Phillips
Affiliation:
Fauna & Flora International, Pembroke St, Cambridge, CB2 3QZ, UK
A. Todd
Affiliation:
Dzanga Sangha Project, World Wildlife Fund, Bangui, Central African Republic
K. Jirků-Pomajbíková
Affiliation:
The Czech Academy of Sciences, Biology Centre, Institute of Parasitology, Branišovská 31, 370 05České Budějovice, Czech Republic Department of Medical Biology, Faculty of Sciences, University of South Bohemia, Branišovská 31, České Budějovice, 370 05, Czech Republic
J. Benavides
Affiliation:
Departamento de Ecología y Biodiversidad, Facultad de Ciencias de la Vida, Universidad Andrés Bello, Republica 440, Santiago, Chile
D. Modrý
Affiliation:
The Czech Academy of Sciences, Biology Centre, Institute of Parasitology, Branišovská 31, 370 05České Budějovice, Czech Republic Department of Pathology and Parasitology, Faculty of Veterinary Medicine, University of Veterinary and Pharmaceutical Sciences Brno, Palackého tř. 1946/1, 612 42Brno, Czech Republic European Institute for Technology (CEITEC), University of Veterinary and Pharmaceutical Sciences Brno, Palackého tř. 1946/1, 612 42Brno, Czech Republic
I. Čepička*
Affiliation:
Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 44Prague, Czech Republic
*
Author for correspondence: I. Čepička, E-mail: ivan.cepicka@centrum.cz

Abstract

We investigated intestinal trichomonads in western lowland gorillas, central chimpanzees and humans cohabiting the forest ecosystem of Dzanga-Sangha Protected Area in Central African Republic, using the internal transcribed spacer (ITS) region and SSU rRNA gene sequences. Trichomonads belonging to the genus Tetratrichomonas were detected in 23% of the faecal samples and in all host species. Different hosts were infected with different genotypes of Tetratrichomonas. In chimpanzees, we detected tetratrichomonads from ‘novel lineage 2’, which was previously reported mostly in captive and wild chimpanzees. In gorillas, we found two different genotypes of Tetratrichomonas. The ITS region sequences of the more frequent genotype were identical to the sequence found in a faecal sample of a wild western lowland gorilla from Cameroon. Sequences of the second genotype from gorillas were almost identical to sequences previously obtained from an anorexic French woman. We provide the first report of the presence of intestinal tetratrichomonads in asymptomatic, apparently healthy humans. Human tetratrichomonads belonged to the lineage 7, which was previously reported in domestic and wild pigs and a domestic horse. Our findings suggest that the ecology and spatial overlap among hominids in the tropical forest ecosystem has not resulted in exchange of intestinal trichomonads among these hosts.

Type
Research Article
Copyright
Copyright © Cambridge University Press 2019

Introduction

Trichomonads (Excavata: Parabasalia) are anaerobic, flagellated protists, which commonly inhabit the digestive, oral, or urogenital tract of various invertebrate and vertebrate hosts. Most of them are beneficial mutualists or commensals of termites, while only a minority has been described among vertebrates (Čepička et al., Reference Čepička, Dolan, Gile, Archibald, Simpson and Slamovits2017). The trichomonads that inhabit the intestines of vertebrates are mostly considered commensals, however, notable exceptions exist including Histomonas meleagridis, an important pathogen of poultry, and Dientamoeba fragilis, whose pathogenic potential for humans is debated (Wong et al., Reference Wong, Faulder and Robinson2018). In contrast, trichomonad species that have escaped the intestines into other internal organs (e.g. urogenital or respiratory tract) are often pathogenic for their hosts. The most important extraintestinal trichomonads causing diseases among humans and livestock are Trichomonas vaginalis (humans), T. gallinae (various birds) and Tritrichomonas foetus (cattle) (Honigberg, Reference Honigberg and Kreier1978, Reference Honigberg1990). Historically, it was thought that most intestinal trichomonads had a rather limited host range, which is true for species infecting termites (e.g. Tai et al., Reference Tai, James, Nalepa, Scheffrahn, Perlman and Keeling2015). In contrast, it has been shown that some trichomonad species from vertebrates can infect a broad range of hosts (for examples see Čepička et al., Reference Čepička, Dolan, Gile, Archibald, Simpson and Slamovits2017). Interestingly, several bird-infecting trichomonads of the genus Trichomonas were recognized as close relatives of pathogenic trichomonads in humans including T. vaginalis and T. tenax (Maritz et al., Reference Maritz, Land, Carlton and Hirt2014). These results call for further investigation of potentially zoonotic trichomonads in humans and their animal reservoirs.

Although trichomonad species can cause important diseases in humans and livestock, the diversity of trichomonads infecting vertebrates has been largely understudied. This is, surprisingly, true also for non-human primates (NHP), the closest relatives of humans. Particularly, the close phylogenetic relationship between great apes and humans results in high potential of pathogen exchange (e.g. Calvignac-Spencer et al., Reference Calvignac-Spencer, Leendertz and Gillespie2012). The historical records of trichomonads from NHP, summarized in Smejkalová et al. (Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012), lack accurate morphological descriptions and had been published prior to the introduction of molecular methods, therefore the identity of these trichomonads remains doubtful. Smejkalová et al. (Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012) recorded eight or nine trichomonad species in various captive NHP including chimpanzees based on the small subunit ribosomal RNA (SSU rRNA) gene sequences. Later studies confirmed the high prevalence of intestinal trichomonads in wild chimpanzees and other NHP (Rushmore et al., Reference Rushmore, Allison, Edwards, Bagal, Altizer, Cranfield, Glenn, Liu, Mudakikwa, Mugisha, Muller, Stumpf, Thompson, Wrangham and Yabsley2015; dos Santos et al., Reference dos Santos, de Jesus, McIntosh, Carreiro, Batista, do Bomfim Lopez, Neves and Lopes2017). However, the information on the occurrence of intestinal trichomonads in NHP is still scarce.

In order to understand the diversity and zoonotic potential of primate intestinal trichomonads, we performed non-invasive monitoring of trichomonads in western lowland gorillas, central chimpanzees and humans co-inhabiting Dzanga Sangha Protected Areas (DSPA) in the south-western Central African Republic as part of long-term monitoring focused on pathogen transmission among gorillas and people in the natural tropical forest ecosystem (Sak et al., Reference Sak, Petrzelkova, Kvetonova, Mynarova, Shutt, Pomajbikova, Kalousova, Modry, Benavides, Todd and Kvac2013; Hasegawa et al., Reference Hasegawa, Modrý, Kitagawa, Shutt, Todd, Kalousová, Profousova and Petrželková2014; Pafčo at al., Reference Pafčo, Benavides, Pšenková-Profousová, Modrý, Červená, Shutt, Hasegawa, Fuh, Todd and Petrželková2017, Reference Pafčo, Čížková, Kreisinger, Hasegawa, Vallo, Shutt, Todd, Petrželková and Modrý2018).

Material and methods

Study area

The study was conducted in DSPA, Central African Republic. DSPA is comprised of the strictly protected Dzanga Ndoki National Park (1222 km2) with restricted human access, and the Dzanga Sangha Dense Forest Special Reserve (3159 km2), a multiple-use zone in which human activities are differentially controlled (Carroll, Reference Carroll1986; Blom et al., Reference Blom, Almasi, Heitkonig, Kpanou and Prins2001). In 1997, the DSPA launched the Primate Habituation Program (PHP), with the specific aim of habituating western lowland gorillas for tourism and research. There are no permanent inhabitants in the Park, but the Park and PHP employees from several local ethnicities (working as gorilla trackers, assistants and Park ecoguards), foreign researchers and volunteers stay temporarily in the PHP/ecoguard camps and move around the Park. Park and PHP staff live outside of the Park with their families, in the town of Bayanga, and villages of Yandoumbe and Mossapoula. For more information about the research site and sampled hosts see Hasegawa et al. (Reference Hasegawa, Modrý, Kitagawa, Shutt, Todd, Kalousová, Profousova and Petrželková2014) and Sak et al. (Reference Sak, Petrzelkova, Kvetonova, Mynarova, Shutt, Pomajbikova, Kalousova, Modry, Benavides, Todd and Kvac2013).

Study subjects and sample collection

Ape sampling was carried out between 2007 and 2011 at the two PHP research camps in the Dzanga Sector of the National Park: (i) Bai Hokou, (ii) Mongambe and their surroundings. We collected faecal samples during follows of two habituated gorilla groups (Makumba, Mayele) and early in the morning (7–9 am) in the night nests of two gorilla groups under habituation, three unhabituated gorilla groups and two unhabituated chimpanzee groups. Stool samples from humans were obtained during regular health monitoring checks of Park and PHP employees. All sampled humans self-assessed themselves as healthy with no health problems or clinical signs of any disease. They regularly entered and stayed in the park. An additional sample of goat faeces was obtained from a household in Bayanga given the potential presence of trichomonads in livestock. Samples were either stored in 96% ethanol or (in 2010) inoculated into Dobell and Laidlaw's biphasic medium (Dobell and Laidlaw, Reference Dobell and Laidlaw1926) and cultivated at 37 °C after transportation to the camp. Isolates were maintained in xenic cultures by serial transfer every 2nd or 3rd day for three or four times. Cultures were also continuously examined by using a light microscope and when trichomonads were observed, 500 µL of the culture was preserved in 96% ethanol. Faecal samples were fixed in 96% ethanol. Faecal samples and trichomonad cultures were transported to the Department of Zoology of Charles University, Prague, Czech Republic.

DNA isolation, amplification and sequencing

First, faecal samples and cultured isolates were washed three times in sterile phosphate-buffered saline buffer to remove ethanol from the sample. Then, total DNA was extracted from preserved cultured samples using the DNeasy Blood & Tissue Kit (Qiagen) and from faecal samples using the QIAamp DNA Stool Mini Kit (Qiagen). Primers 16Sl (TACTTGGTTGATCCTGCC; Tachezy et al., Reference Tachezy, Tachezy, Hampl, Sedinova, Vanacova, Vrlik, van Ranst, Flegr and Kulda2002) and 16SRR (TCACCTACCGTTACCTTG; Cepicka et al., Reference Cepicka, Kutisová, Tachezy, Kulda and Flegr2005) were used to amplify the SSU rRNA gene of trichomonads. Primers ITSF (TTCAGTTCAGCGGGTCTTCC) and ITSR (GTAGGTGAACCTGCCGTTGG) (Cepicka et al., Reference Cepicka, Kutisová, Tachezy, Kulda and Flegr2005) were used to amplify the internal transcribed spacer (ITS) region (ITS1-5.8S rRNA gene-ITS2). Polymerase chain reaction (PCR) products were purified using the QIAquick PCR Purification Kit (Qiagen), and were directly sequenced on an ABI Prism 3130 Genetic Analyser (Applied Biosystems).

Phylogenetic analysis

We built two data sets comprising the ITS region (the first data set) and SSU rRNA gene (the second data set) sequences of trichomonads, including newly determined sequences. Sequences were aligned using MAFFT (Katoh et al., Reference Katoh, Misawa, Kuma and Miyata2002) on the MAFFT 7 server https://mafft.cbrc.jp/alignment/server/ with the G-INS-i algorithm at default settings. The alignments were manually edited using BioEdit 7.0.9.0 (Hall, Reference Hall1999). Final data sets of unambiguously aligned characters consisted of 329 and 1522 positions, respectively, and are available upon request. Phylogenetic trees were constructed using both maximum likelihood (ML) and Bayesian methods. ML analysis was performed in RAxML 8.0.0 (Stamatakis, Reference Stamatakis2014) under the GTR + I + Γ model, which was for both data sets selected by the Akaike Information Criterion implemented in ModelGenerator v 85 (Keane et al., Reference Keane, Creevey, Pentony, Naughton and McInerney2004). Node support was assessed by ML analysis of 1000 bootstrap data sets. Bayesian analysis was performed in MrBayes 3.2.2 (Ronquist et al., Reference Ronquist, Teslenko, van der Mark, Ayres, Darling, Höhna, Larget, Liu, Suchard and Huelsenbeck2012) using the GTR + I + Γ + covarion model with four discrete categories. Four MCMCs were run for 3 000 000 and 2 000 000 generations, respectively, until the mean standard deviation of split frequencies based on last 75% of generations was lower than 0.01. The first 25% of trees were removed as burn-in.

Results

In total, 201 faecal samples (151 gorillas, 37 humans, 12 chimpanzees and a single goat) and 63 cultures established from fresh faeces (43 gorillas, 18 humans and two chimpanzees) were examined for the presence of trichomonads. Trichomonads were detected in 23% of the faecal samples using the ITS region amplification and 37% of the cultured samples were microscopically positive for actively swimming trophozoites. We determined sequences of the ITS region from ten chimpanzee samples, 45 gorilla samples, four human samples and one sequence from the goat faeces (Table S1).

All sequences of the ITS region obtained from chimpanzees were identical to the sequence of an isolate PAN6 from a captive chimpanzee (Smejkalová et al., Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012) and clustered within the ‘novel lineage 2’ as defined by Smejkalová et al. (Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012) (Fig. 1), which mostly comprises isolates from chimpanzees (Smejkalová et al., Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012; Rushmore et al., 2014). Smejkalová et al. (Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012) detected this lineage also in two samples of captive primates, which were kept in the same zoo pavilion as chimpanzees who harboured tetratrichomonads from ‘novel lineage 2’, namely siamang (Symphalangus syndactylus) and hanuman monkey (Semnopithecus entellus); but only the SSU rRNA gene sequence is available from them. Sequences of the ITS region of trichomonads from gorilla samples formed two genotypes. The most prevalent one, here referred to as the gorilla genotype CAR I, was represented by 41 sequences that were identical to the GenBank sequence JX159965 obtained from a faecal sample of a wild gorilla in Cameroon (Hamad et al., Reference Hamad, Keita, Peeters, Delaporte, Raoult and Bittar2014). The second less prevalent genotype, here referred to as the gorilla genotype CAR II, was represented by four sequences that shared a 99% similarity with the GenBank sequence JX132891 labelled as ‘Trigonella environmental sample’, obtained from a French human patient suffering from anorexia nervosa (Gouba et al., Reference Gouba, Raoult and Drancourt2014). A mixed infection of both genotypes in a single sample from a habituated gorilla was revealed by the presence of double peaks in the chromatogram. The phylogenetic analysis (Fig. 1) showed that these two genotypes present in gorillas were not directly related to each other but formed an unsupported clan with the ‘novel lineage 2’ composed mostly of sequences from chimpanzees. The ITS sequence from the goat sample shared 99% similarity with the sequence of isolate Tetratrichomonas sp. ‘2000-0017’, which was obtained from the prepuce of a domestic bull (Walker et al., Reference Walker, Hayes, Sawyer, Nordhausen, Van Hoosear and BonDurant2003) and branched within the Tetratrichomonas lineage 10 as defined by Cepicka et al. (Reference Cepicka, Hampl, Kulda and Flegr2006), containing trichomonads from cattle, tortoises and captive siamangs. All four ITS region sequences obtained from human samples were identical to the sequence of isolate PDOU3 from a wild boar obtained in the Czech Republic (Cepicka et al., Reference Cepicka, Hampl, Kulda and Flegr2006), and were placed to the Tetratrichomonas lineage 7, which contained also isolates from pigs, horses and captive langurs.

Fig. 1. Phylogenetic tree of the genus Tetratrichomonas, based on the ITS region sequences, constructed by the maximum likelihood in RAxML (GTR + I + Γ model). Values at branches represent statistical support in bootstrap values (RAxML)/posterior probabilities (MrBayes). Support values below 50/0.50 are not shown. Newly determined sequences are in bold.

We determined the SSU rRNA gene sequences of trichomonads from three gorillas, two chimpanzees and one human (Fig. 2). The analysis confirmed the phylogenetic position of chimpanzee trichomonads (Tetratrichomonas ‘novel lineage 2’), human trichomonads (Tetratrichomonas lineage 7) as well as the position of the more abundant trichomonad genotype from gorillas (i.e. the gorilla genotype CAR I). Gorilla isolates CAR76 and CAR107, from which ITS sequences were not available, had identical SSU rRNA gene sequences with the isolate CAR50. The newly determined sequences are deposited in GenBank under accession numbers MN309991–MN309996 and MN319468-MN319472.

Fig. 2. Phylogenetic tree of the genus Tetratrichomonas, based on the SSU rRNA gene sequences, constructed by the maximum likelihood in RAxML (GTR + I + Γ model). Values at branches represent statistical support in bootstrap values (RAxML)/posterior probabilities (MrBayes). Support values below 50/0.50 are not shown or are represented by an asterisk (*). Newly determined sequences are in bold.

Discussion

Intestinal trichomonads of NHP are poorly researched, limiting our understanding of their zoonotic and pathogenic potential. One reason for the limited knowledge to date may be because many trichomonad species do not produce cysts (see Čepička et al., Reference Čepička, Dolan, Gile, Archibald, Simpson and Slamovits2017). Thus, standard coproscopic methods are not suitable for their detection. Trichomonads in general can be diagnosed based on the presence of motile trophozoites in fresh faeces, but this method does not allow accurate identification. Cultivation-dependent methods are also useful for the diagnosis of intestinal trichomonads (in NHP: Smejkalová et al., Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012). Particular species can be differentiated by a detailed morphological study or by an analysis of the SSU rRNA gene or ITS region sequences (Cepicka et al., Reference Cepicka, Hampl, Kulda and Flegr2006, Reference Cepicka, Hampl and Kulda2010). Only a few studies on trichomonads in NHP have implemented such molecular approaches (Smejkalová et al., Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012; Rushmore et al., Reference Rushmore, Allison, Edwards, Bagal, Altizer, Cranfield, Glenn, Liu, Mudakikwa, Mugisha, Muller, Stumpf, Thompson, Wrangham and Yabsley2015; dos Santos et al., Reference dos Santos, de Jesus, McIntosh, Carreiro, Batista, do Bomfim Lopez, Neves and Lopes2017).

Our results showed that intestinal trichomonads are a common part of the gastrointestinal microbiota of wild central chimpanzees and western lowland gorillas. For the first time, we also detected intestinal tetratrichomonads in apparently healthy humans (but see Gouba et al., Reference Gouba, Raoult and Drancourt2014). All trichomonads detected in this study belonged to the genus Tetratrichomonas (specifically, group A sensu Cepicka et al., Reference Cepicka, Hampl, Kulda and Flegr2006); however, isolates from various hosts occupied different phylogenetic positions within this genus. Tetratrichomonas is one of the largest genera of intestinal trichomonads and its species have been found in a broad range of vertebrates and invertebrates (e.g. Cepicka et al., Reference Cepicka, Hampl, Kulda and Flegr2006; Smejkalová et al., Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012; Ibañez-Escribano et al., Reference Ibañez-Escribano, Nogal-Ruiz, Delclaux, Martinez-Nevado and Ponce-Gordo2013). At least two Tetratrichomonas species have also been found in the respiratory tract of humans (Cepicka et al., Reference Cepicka, Kutisová, Tachezy, Kulda and Flegr2005; Kutisova et al., Reference Kutisova, Kulda, Cepicka, Flegr, Koudela, Teras and Tachezy2005; Lopez-Escamilla et al., Reference Lopez-Escamilla, Sanchez-Aguillon, Alatorre-Fernandez, Aguilar-Zapata, Arroyo-Escalante, Arellano, Moncada-Barron, Romero-Valdovinos, Martinez-Hernandez, Rodriguez-Zulueta and Maravilla2013). Although several studies reported transmission of trichomonads between different hosts (see Čepička et al., Reference Čepička, Dolan, Gile, Archibald, Simpson and Slamovits2017), our results showed that apes and humans inhabiting the forest ecosystem of DSPA are infected with different trichomonad genotypes, with some likely being host-specific. We also obtained the first sequence data of tetratrichomonads isolated from a domestic goat; the phylogenetic analysis showed that the goat trichomonads were distinct from those obtained from humans and NHP. Our results indicate that the ecology and the level of spatial overlap among great apes and humans in the studied tropical ecosystem do not suggest exchange of intestinal non-cyst-forming trichomonads. Trichomonads are likely to require closer contact between hosts to allow cross-species transmission, even though two of studied groups of gorillas are habituated to human presence – meaning they are frequently exposed to close human observation. Smejkalová et al. (Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012) indicated that the transmission of trichomonads in captive conditions is possible, particularly in the zoo environment, as animals can be in close proximity to other reservoir hosts.

All trichomonad-positive chimpanzees from DSPA were infected with tetratrichomonads from ‘novel lineage 2’ as defined by Smejkalová et al. (Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012). Tetratrichomonads from the same lineage were recorded in faecal samples of wild chimpanzees from Kibale NP, Uganda (Rushmore et al., Reference Rushmore, Allison, Edwards, Bagal, Altizer, Cranfield, Glenn, Liu, Mudakikwa, Mugisha, Muller, Stumpf, Thompson, Wrangham and Yabsley2015) and in all but one, isolates from captive chimpanzees from two Czech zoos by Smejkalová et al. (Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012). Smejkalová et al. (Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012) detected this lineage also in one sample of siamang (Symphalangus syndactylus) and one of hanuman monkey (Semnopithecus entellus). Those animals were kept in Ostrava Zoo in the same pavilion as the chimpanzees who harboured tetratrichomonads from ‘novel lineage 2’. We conclude that chimpanzees are the main hosts and those trichomonads are able to persist in captive populations, but in zoo environment they can be transmitted from chimpanzees to other primate species.

Gorillas were infected by two different genotypes of Tetratrichomonas. Both genotypes are related to the chimpanzee ‘novel lineage 2’ as defined by Smejkalová et al. (Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012). The ITS region sequence of the more frequent gorilla genotype is identical to the one identified by Hamad et al. (Reference Hamad, Keita, Peeters, Delaporte, Raoult and Bittar2014) in a faecal sample of a wild western lowland gorilla in south-central Cameroon; this tetratrichomonad thus may be specific for this host species. Hamad et al. (Reference Hamad, Keita, Peeters, Delaporte, Raoult and Bittar2014) identified this tetratrichomonad as T. buttreyi, however, according to Cepicka et al. (Reference Cepicka, Hampl, Kulda and Flegr2006), T. buttreyi belongs to the tetratrichomonad lineage 7.

The second gorilla genotype was found only in four gorilla samples (two samples from the habituated groups and two from a group under habituation ranging nearby Bai Hokou). This genotype is almost identical to a sequence obtained from a French woman suffering from a severe form of anorexia nervosa with malnutrition (Gouba et al., Reference Gouba, Raoult and Drancourt2014). As there is no available information regarding how this woman became infected, it is difficult to interpret the occurrence of almost identical trichomonads in wild lowland gorillas.

With exception of the above described case (Gouba et al., Reference Gouba, Raoult and Drancourt2014), there have been no reports of intestinal tetratrichomonads in humans. We newly report the presence of the tetratrichomonads in stool samples of people of BaAka hunter-gatherer ethnic, employed as gorilla trackers. However, we did not detect tetratrichomonads in field assistants or ecoguards from various Bantu agricultural tribes living mostly in Bayanga. Humans were infected with tetratrichomonads from the lineage 7, which correspond with T. buttreyi that has been reported from domestic and wild pigs and a domestic horse in Europe (Cepicka et al., Reference Cepicka, Hampl, Kulda and Flegr2006). Domestic pigs are kept only by Bantu inhabitants of Bayanga, while BaAka people do not keep any livestock. There are two species of wild suids occurring in DSPA, the red river hog (Potamochoerus porcus), and the giant forest hog (Hylochoerus meinertzhageni). Further studies in DSPA should focus on examination of more sympatric mammals including suids.

Interestingly, we did not detect Pentatrichomonas hominis, a well-known intestinal trichomonad of various mammals including captive NHP and humans (Wenrich, Reference Wenrich1944; Flick, Reference Flick1954; Reardon and Rininger, Reference Reardon and Rininger1968; Myers and Kuntz, Reference Myers and Kuntz1972; Smejkalová et al., Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012; Li et al., Reference Li, Ying, Gong, Li, Yang, Li and Zhang2016), in any of examined hosts in DSPA. This raises a possibility that in the natural conditions intestinal ecosystems of hominids including humans keeping traditional hunter-gather lifestyle are inhabited by tetratrichomonads. Subsequently, the transition from traditional to modern, agricultural, or western-like lifestyles in humans and captive condition in NPH might have resulted in a gradual decline of tetratrichomonads and acquisition of P. hominis from reservoir hosts. Very old studies using traditional methods (for both parasitology and microbiology) found interesting associations among trichomonads, diet and bacteria (Ratcliffe, Reference Ratcliffe1928), however those studies have been completely neglected by scientific community. A recent study on microbiome of coexisting BaAka and Bantu in DSPA has revealed that their distinct gut microbiomes reflect gradients of traditional subsistence strategies and comparison with US Americans suggests that agriculture and industrialization triggered the loss of traditional microbes (Gomez et al., Reference Gomez, Petrzelkova, Yeoman, Vlckova, Mrázek, Koppova, Carbonero, Ulanov, Modry, Todd, Torralba, Nelson, Gaskins, Wilson, Stumpf, White and Leigh2015). Clayton et al. (Reference Clayton, Vangay, Huang, Ward, Hillmann, Al-Ghalith, Travis, Long, Tuan, Minh, Cabana, Nadler, Toddes, Murphy, Glander, Johnson and Knights2016) showed that captivity has a parallel effect on the NHP gut microbiome to that of westernization in humans. Moreover, industrialization is also correlated with a nearly complete disappearance of intestinal parasites in humans and the lower bacterial diversity in industrialized countries could be partially an indirect consequence of the disappearance of gut eukaryotes (Chabé et al., Reference Chabé, Lokmer and Ségurel2017; Rowan-Nash et al., Reference Rowan-Nash, Korry, Mylonakis and Belenky2019). In the light of our findings and our knowledge on hominids' microbiomes, we suggest that further research on trichomonads in humans with different lifestyles and also wild and captive NHP should be conducted together with analyses of their microbiomes.

Our study has shown that hominids sharing the DSPA ecosystem harbour different lineages of tetratrichomonads. Based on our results and previous studies (Smejkalová et al., Reference Smejkalová, Petrželková, Pomajbíková, Modrý and Čepička2012; Hamad et al., Reference Hamad, Keita, Peeters, Delaporte, Raoult and Bittar2014; Rushmore et al., Reference Rushmore, Allison, Edwards, Bagal, Altizer, Cranfield, Glenn, Liu, Mudakikwa, Mugisha, Muller, Stumpf, Thompson, Wrangham and Yabsley2015), we suggest that tetratrichomonads detected in chimpanzees as well as the more prevalent genotype of gorilla tetratrichomonads are host-specific. However, the first detection of tetratrichomonads of the lineage 7 in humans, previously reported mostly from pigs, opens further questions about possible transmission of intestinal trichomonads among phylogenetically distant hosts inhabiting the DSPA. Screening of a wider host spectrum is needed to better understand the epidemiology of those neglected protists. Moreover, further studies examining trichomonads in wild (not only captive) NHP, other wildlife, livestock and humans with different lifestyles are warranted in order to increase our knowledge about their biology and diversity.

Supplementary material

The supplementary material for this article can be found at https://doi.org/10.1017/S0031182019001343.

Acknowledgements

We would like to express our gratitude to the government of the Central African Republic and the World Wildlife Fund for granting permission to conduct our research; the Ministre de l'Education Nationale, de l'Alphabetisation, de l'Enseignement Superieur, et de la Recherche for providing research permits; and the Primate Habituation Programme for providing logistical support in the field. Finally yet importantly, we would like to thank all of the trackers and assistants in Dzanga Sangha Protected Areas, Central African Republic.

Financial support

This study was supported by Czech Science Foundation (Grant No. 206/09/0927).

Conflicts of interest

None.

Ethical standards

The research complied with the legal requirements of the Central African Republic and adhered to the research protocol of DSPA. All sample collection from humans was approved by the Anthropology Department Research Ethics and Data Protection Committee; University of Durham, U.K. Verbal non-recorded consent was obtained from all examined persons and the samples were anonymized. We also obtained verbal non-recorded permission from goat owners to collect animal faecal samples. The collection of faecal samples from gorillas, chimpanzees and livestock was noninvasive and did not cause any observable distress to the animals. Sample importation to the EU was approved by the State Veterinary Authority of the Czech Republic.

Footnotes

*

Equal authors

References

Blom, A, Almasi, A, Heitkonig, IMA, Kpanou, JB and Prins, HHT (2001) A survey of the apes in the Dzanga-Ndoki National Park, Central African Republic: a comparison between the census and survey methods of estimating the gorilla (Gorilla gorilla gorilla) and chimpanzee (Pan troglodytes) nest group density. African Journal of Ecology 39, 98105.CrossRefGoogle Scholar
Calvignac-Spencer, S, Leendertz, SAJ and Gillespie, TR (2012) Wild great apes as sentinels and sources of infectious disease. Clinical Microbiology and Infection 18, 521527.CrossRefGoogle ScholarPubMed
Carroll, RW (1986) The Creation, Development, Protection, and Management of the Dzanga-Sangha Dense Forest Sanctuary and the Dzanga-Ndoki National Park in Southwestern Central African Republic. New Haven, Connecticut: Yale University School of Forestry and Environmental Studies.Google Scholar
Cepicka, I, Kutisová, K, Tachezy, J, Kulda, J and Flegr, J (2005) Cryptic species within the Tetratrichomonas gallinarum species complex revealed by molecular polymorphism. Veterinary Parasitology 128, 1121.CrossRefGoogle ScholarPubMed
Cepicka, I, Hampl, V, Kulda, J and Flegr, J (2006) New evolutionary lineages, unexpected diversity, and host specificity in the parabasalid genus Tetratrichomonas. Molecular Phylogenetics and Evolution 39, 542551.CrossRefGoogle ScholarPubMed
Cepicka, I, Hampl, V and Kulda, J (2010) Critical taxonomic revision of parabasalids with description of one new genus and three new species. Protist 161, 400433.CrossRefGoogle ScholarPubMed
Čepička, I, Dolan, MF and Gile, GH (2017) Parabasalia. In Archibald, JM, Simpson, AGB and Slamovits, CH (eds), Handbook of the Protists. Cham, Switzerland: Springer, pp. 11751218.CrossRefGoogle Scholar
Chabé, M, Lokmer, A and Ségurel, L (2017) Gut protozoa: friends or foes of the human gut microbiota? Trends in Parasitology 33, 925934.CrossRefGoogle ScholarPubMed
Clayton, JB, Vangay, P, Huang, H, Ward, T, Hillmann, BM, Al-Ghalith, GA, Travis, DA, Long, HT, Tuan, BV, Minh, VV, Cabana, F, Nadler, T, Toddes, B, Murphy, T, Glander, KE, Johnson, TJ and Knights, D (2016) Captivity humanizes the primate microbiome. Proceedings of the National Academy of Sciences 113, 1037610381.CrossRefGoogle ScholarPubMed
Dobell, C and Laidlaw, PP (1926) On the cultivation of Entamoeba histolytica and some other entozoic amoebae. Parasitology 18, 283318.CrossRefGoogle Scholar
dos Santos, CS, de Jesus, VLT, McIntosh, D, Carreiro, CC, Batista, LCO, do Bomfim Lopez, B, Neves, DM and Lopes, CWG (2017) Morphological, ultrastructural, and molecular characterization of intestinal tetratrichomonads isolated from non-human primates in southeastern Brazil. Parasitology Research 116, 24792488.CrossRefGoogle ScholarPubMed
Flick, EW (1954) Experimental analysis of some factors influencing variation in the flagellar number of Trichomonas hominis from man and other primates and their relationship to nomenclature. Experimental Parasitology 3, 105121.CrossRefGoogle ScholarPubMed
Gomez, A, Petrzelkova, K, Yeoman, CJ, Vlckova, K, Mrázek, J, Koppova, I, Carbonero, F, Ulanov, A, Modry, D, Todd, A, Torralba, M, Nelson, KE, Gaskins, HR, Wilson, B, Stumpf, RM, White, BA and Leigh, S (2015) Gut microbiome composition and metabolomic profiles of wild western lowland gorillas (Gorilla gorilla gorilla) reflect host ecology. Molecular Ecology 24, 25512565.CrossRefGoogle ScholarPubMed
Gouba, N, Raoult, D and Drancourt, M (2014) Gut microeukaryotes during anorexia nervosa: a case report. BMC Research Notes 7, 3336.CrossRefGoogle ScholarPubMed
Hall, TA (1999) Bioedit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41, 9598.Google Scholar
Hamad, I, Keita, MB, Peeters, M, Delaporte, E, Raoult, D and Bittar, F (2014) Pathogenic eukaryotes in gut microbiota of western lowland gorillas as revealed by molecular survey. Scientific Reports 4, 6417.CrossRefGoogle ScholarPubMed
Hasegawa, H, Modrý, D, Kitagawa, M, Shutt, KA, Todd, A, Kalousová, B, Profousova, I and Petrželková, KJ (2014) Great apes cohabiting the forest ecosystem in Central African Republic harbour the same hookworms. PLoS Neglected Tropical Diseases 8, e2715.CrossRefGoogle ScholarPubMed
Honigberg, BM (1978) Trichomonads of veterinary importance. In Kreier, JP (ed.), Parasitic Protozoa, vol. 2. New York, US: Academic Press, pp. 163273.Google Scholar
Honigberg, BM (1990) Trichomonads Parasitic in Humans. New York, US: Springer.CrossRefGoogle Scholar
Katoh, K, Misawa, K, Kuma, K and Miyata, T (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research 30, 30593066.CrossRefGoogle ScholarPubMed
Ibañez-Escribano, A, Nogal-Ruiz, JJ, Delclaux, M, Martinez-Nevado, E and Ponce-Gordo, F (2013) Morphological and molecular identification of Tetratrichomonas flagellates from the giant anteater (Myrmecophaga tridactyla). Research in Veterinary Science 95, 176181.CrossRefGoogle Scholar
Keane, TM, Creevey, CJ, Pentony, MM, Naughton, TJ and McInerney, JO (2004) Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified. BMC Evolutionary Biology 6, 29.CrossRefGoogle Scholar
Kutisova, K, Kulda, J, Cepicka, I, Flegr, J, Koudela, B, Teras, J and Tachezy, J (2005) Tetratrichomonads from the oral cavity and respiratory tract of humans. Parasitology 131, 309319.CrossRefGoogle ScholarPubMed
Li, WC, Ying, M, Gong, PT, Li, JH, Yang, J, Li, H and Zhang, XC (2016) Pentatrichomonas hominis: prevalence and molecular characterization in humans, dogs, and monkeys in Northern China. Parasitology Research 115, 569574.CrossRefGoogle ScholarPubMed
Lopez-Escamilla, E, Sanchez-Aguillon, F, Alatorre-Fernandez, CP, Aguilar-Zapata, D, Arroyo-Escalante, S, Arellano, T, Moncada-Barron, D, Romero-Valdovinos, M, Martinez-Hernandez, F, Rodriguez-Zulueta, P and Maravilla, P (2013) New Tetratrichomonas species in two patients with pleural empyema. Journal of Clinical Microbiology 51, 31433146.CrossRefGoogle ScholarPubMed
Maritz, JM, Land, KM, Carlton, JM and Hirt, RP (2014) What is the importance of zoonotic trichomonads for human health? Trends in Parasitology 30, 333341.CrossRefGoogle ScholarPubMed
Myers, BJ and Kuntz, RE (1972) A checklist of parasites and commensals reported for the chimpanzee (Pan). Primates 13, 433471.CrossRefGoogle Scholar
Pafčo, B, Benavides, JA, Pšenková-Profousová, I, Modrý, D, Červená, B, Shutt, KA, Hasegawa, H, Fuh, T, Todd, AF and Petrželková, KJ (2017) Do habituation, host traits and seasonality have an impact on protist and helminth infections of wild western lowland gorillas? Parasitology Research 116, 34013410.CrossRefGoogle ScholarPubMed
Pafčo, B, Čížková, D, Kreisinger, J, Hasegawa, H, Vallo, P, Shutt, K, Todd, A, Petrželková, KJ and Modrý, D (2018) Metabarcoding analysis of strongylid nematode diversity in two sympatric primate species. Scientific Reports 8, 5933.CrossRefGoogle ScholarPubMed
Ratcliffe, LH (1928) The numbers of trichomonads in rats on diets of different protein content in relation to pH and bacteria in the cecum. American Journal of Epidemiology 8, 910934.CrossRefGoogle Scholar
Reardon, LV and Rininger, BF (1968) A survey of parasites in laboratory primates. Laboratory Animal Care 18, 577580.Google ScholarPubMed
Ronquist, F, Teslenko, M, van der Mark, P, Ayres, DL, Darling, A, Höhna, S, Larget, B, Liu, L, Suchard, MA and Huelsenbeck, JP (2012) Mrbayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61, 539542.CrossRefGoogle ScholarPubMed
Rowan-Nash, AD, Korry, BJ, Mylonakis, E and Belenky, P (2019) Cross-domain and viral interactions in the microbiome. Microbiology and Molecular Biology Reviews 83, e00044.CrossRefGoogle ScholarPubMed
Rushmore, J, Allison, AB, Edwards, EE, Bagal, U, Altizer, S, Cranfield, MR, Glenn, TC, Liu, H, Mudakikwa, A, Mugisha, L, Muller, MN, Stumpf, RM, Thompson, ME, Wrangham, R and Yabsley, MJ (2015) Screening wild and semi-free ranging great apes for putative sexually transmitted diseases: evidence of Trichomonadidae infections. American Journal of Primatology 77, 10751085.CrossRefGoogle ScholarPubMed
Sak, B, Petrzelkova, KJ, Kvetonova, D, Mynarova, A, Shutt, KA, Pomajbikova, K, Kalousova, B, Modry, D, Benavides, J, Todd, A and Kvac, M (2013) Long-term monitoring of microsporidia, Cryptosporidium and Giardia infections in western lowland gorillas (Gorilla gorilla gorilla) at different stages of habituation in Dzanga Sangha Protected Areas, Central African Republic. PLoS One 8, e71840.CrossRefGoogle ScholarPubMed
Smejkalová, P, Petrželková, KJ, Pomajbíková, K, Modrý, D and Čepička, I (2012) Extensive diversity of intestinal trichomonads of non-human primates. Parasitology 139, 92102.CrossRefGoogle ScholarPubMed
Stamatakis, A (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics (Oxford, England) 30, 13121313.CrossRefGoogle ScholarPubMed
Tachezy, J, Tachezy, R, Hampl, V, Sedinova, M, Vanacova, S, Vrlik, M, van Ranst, M, Flegr, J and Kulda, J (2002) Cattle pathogen Tritrichomonas foetus (Riedmuller, 1928) and pig commensal Tritrichomonas suis (Gruby & Delafond, 1843) belong to the same species. Journal of Eukaryotic Microbiology 49, 154163.CrossRefGoogle ScholarPubMed
Tai, V, James, ER, Nalepa, CA, Scheffrahn, RH, Perlman, SJ and Keeling, CJ (2015) The role of host phylogeny varies in shaping microbial diversity in the hindguts of lower termites. Applied and Environmental Microbiology 81, 10591070.CrossRefGoogle ScholarPubMed
Walker, RL, Hayes, DC, Sawyer, RW, Nordhausen, RW, Van Hoosear, KA and BonDurant, RH (2003) Comparison of the 5.8S rRNA gene and internal transcribed spacer regions of trichomonadid protozoa recovered from the bovine preputial cavity. Journal of Veterinary Diagnostic Investigation 15, 1420.CrossRefGoogle ScholarPubMed
Wenrich, DH (1944) Morphology of the intestinal trichomonad flagellates in man and of similar forms in monkeys, cats, dogs and rats. Journal of Morphology 74, 189211.CrossRefGoogle Scholar
Wong, ZW, Faulder, K and Robinson, JL (2018) Does Dientamoeba fragilis cause diarrhea? A systematic review. Parasitology Research 117, 971980.CrossRefGoogle ScholarPubMed
Figure 0

Fig. 1. Phylogenetic tree of the genus Tetratrichomonas, based on the ITS region sequences, constructed by the maximum likelihood in RAxML (GTR + I + Γ model). Values at branches represent statistical support in bootstrap values (RAxML)/posterior probabilities (MrBayes). Support values below 50/0.50 are not shown. Newly determined sequences are in bold.

Figure 1

Fig. 2. Phylogenetic tree of the genus Tetratrichomonas, based on the SSU rRNA gene sequences, constructed by the maximum likelihood in RAxML (GTR + I + Γ model). Values at branches represent statistical support in bootstrap values (RAxML)/posterior probabilities (MrBayes). Support values below 50/0.50 are not shown or are represented by an asterisk (*). Newly determined sequences are in bold.

Supplementary material: File

Petrželková et al. supplementary material

Table S1

Download Petrželková et al. supplementary material(File)
File 15.2 KB