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X-ray powder diffraction data for monosodium salt azobarbituric acid dihydrate [C8H5N6O6Na.2H2O]

Published online by Cambridge University Press:  04 August 2014

J. Maixner*
Affiliation:
Central Laboratories, Institute of Chemical Technology Prague, Technická 5, 166 28 Prague 6, Czech Republic
J. Rohlíček
Affiliation:
Institute of Physics AS CR,v.v.i., Na Slovance 2, 182 21 Prague 8, Czech Republic
Č. Florián
Affiliation:
Synthesia a.s., Pardubice, Semtín 103, CZ-532 17 Pardubice, Czech Republic
J. Vyňuchal
Affiliation:
Synthesia a.s., Pardubice, Semtín 103, CZ-532 17 Pardubice, Czech Republic
F. Alafid
Affiliation:
Faculty of Chemical Technology, Institute of Organic Chemistry and Technology, University of Pardubice, Studentská 95, 53210 Pardubice, Czech Republic
*
a) Author to whom correspondence should be addressed. Electronic mail: jaroslav.maixner@vscht.cz
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Abstract

X-ray powder diffraction data, unit-cell parameters, and space group for a sodium azobarbituric acid dihydrate are presented [a = 3.546 (1) Å, b = 9.210 (2) Å, c = 9.738 (4) Å, α = 104.07 (4)°, β = 98.09 (6)°, γ = 98.80 (2)°, unit-cell volume V = 299.6 Å3, Z = 1, and space group P − 1]. All the measured lines were indexed. No detectable impurities were observed.

Type
New Diffraction Data
Copyright
Copyright © International Centre for Diffraction Data 2014 

I. INTRODUCTION

Sodium azobarbituric acid dihydrate [C8H5N6O6Na.2H2O] (Figure 1) is an orange-red powder. It is used as the crucial starting material for the synthesis of the industrially important and is now worldwide discussed organic pigment – Pigment Yellow 150, which is the complex of nickel and azobarbituric acid. The pigment is used in paints and in decoration printing inks for laminates.

Figure 1. Structural formula of C8H5N6O6Na.2H2O.

We have inspected the CSD database (Allen, Reference Allen2002) and the PDF4+ database (ICDD, Reference Kabekkodu2012) and have not found any entry for this compound in the mentioned databases. This fact is the reason why we have decided to characterize this compound by X-ray powder diffraction (XRD) technique.

II. SAMPLE PREPARATION

There is more than one way to synthesize monosodium salt azobarbituric acid, but it cannot be prepared by a common diazotization of aminobarbituric acid and the following coupling. The synthetic route using azidoformamidine as the diazo group transfer agent was chosen for the synthesis of azobarbituric acid according to the standard industrial procedure. This synthesis is one-pot reaction, in which azidoformamidine is formed from aminoguanidine and sodium nitrite in acid water media as the first step. In the second step, the diazobarbituric acid is formed and subsequently reacts with an excess of barbituric acid generating azobarbituric acid in the form of dihydrate of monosodium salt in the third step. The final product was dried under vacuum at 70 °C for the elimination of the possible decomposition. This monosodium salt is poorly soluble in water, and its solubility is in the range of tenth of a gram per liter. The thermogravimetric analysis was used to confirm crystal water in the structure of C8H5N6O6Na.2H2O.

III. POWDER DIFFRACTION DATA

The diffraction pattern for the title compound was collected at room temperature with an Empyrean powder diffractometer with transmission Debye–Scherrer geometry using Cu radiation (focusing mirror, generator setting: 45 kV, 40 mA). An ultrafast PIXCel3D detector was employed to collect XRD data over the angular range from 4 to 80 °2θ with a step size of 0.013 °2θ, and a counting time of 2978,4 s step−1. The sample was placed in the 0.3 mm borosilicate glass capillary. The experimental powder diffraction pattern is depicted in Figure 2. The software package HighScore Plus V3.0e(PANalytical, Almelo, Netherlands) was used to smoothen the data, to fit the background, and to eliminate the 2 component; and the top of the smoothed peaks were used to determine the peak positions and intensities of the diffraction peaks (Table 1). The d-values were calculated using Cu 1 radiation (λ = 1.5406 Å).

Figure 2. (Color online) X-ray powder diffraction pattern of C8H5N6O6Na.2H2O using Cu radiation (λ=1.5418 Å).

Table I. Indexed X-ray powder diffraction data for C8H5N6O6Na.2H2O. Only the peaks with I rel of 1 or greater are presented [a = 3.546 (1) Å, b = 9.210 (2) Å, c = 9.738 (4) Å, α = 104.07 (4)°, β = 98.09 (6)°, γ = 98.80 (2)°, unit-cell volume V = 299.6 Å3<>, Z = 1, and space group P − 1]. All lines were indexed. The d-values were calculated using CuK α 1 radiation (λ = 1.5406 Å).

The collected data are consistent with a triclinic unit-cell parameters [a = 3.546 (1) Å, b = 9.210 (2) Å, c = 9.738 (4) Å, α = 104.07 (4)°, β = 98.09 (6)°, γ = 98.80 (2)°, unit-cell volume V = 299.6 Å3, Z = 1, and space group P − 1]. These parameters were derived using DICVOL04 (Boultif and Louër, Reference Boultif and Louër2004 ) with the results all being within the errors indicated. The following figures of merit were achieved: F20 = 45.6 (0.0107,41) (Smith and Snyder, Reference Smith and Snyder1979) and M20 = 26.2 (de Wolff, Reference de Wolff1968).

ACKNOWLEDGEMENTS

This work was supported by the grant no. P106/12/1276 from the Grant Agency of the Czech Republic and by the grant TAČR TA02010781 of the Technological Agency of the Czech Republic.

References

Allen, F. H. (2002). “The Cambridge Structural Database: a quarter of a million crystal structures and rising,” Acta Crystallogr. B 58, 380388.CrossRefGoogle ScholarPubMed
Boultif, A. and Louër, D. (2004). “Powder pattern indexing with the dichotomy method,” J. Appl. Crystallogr. 37, 724731.CrossRefGoogle Scholar
de Wolff, P. M. (1968). “A simplified criterion for the reliability of a powder pattern,” J. Appl. Crystallogr. 1, 108113.CrossRefGoogle Scholar
ICDD (2012). Powder Diffraction File, edited by Kabekkodu, S., International Centre for Diffraction Data, 12 Campus Boulevard, Newton Square, Pennsylvania 19073-3272.Google Scholar
Smith, G. S. and Snyder, R. L. (1979). “ F N: a criterion for rating powder diffraction patterns and evaluating the reliability of powder indexing,” J. Appl. Crystallogr. 12, 6065.CrossRefGoogle Scholar
Figure 0

Figure 1. Structural formula of C8H5N6O6Na.2H2O.

Figure 1

Figure 2. (Color online) X-ray powder diffraction pattern of C8H5N6O6Na.2H2O using Cu radiation (λ=1.5418 Å).

Figure 2

Table I. Indexed X-ray powder diffraction data for C8H5N6O6Na.2H2O. Only the peaks with Irel of 1 or greater are presented [a = 3.546 (1) Å, b = 9.210 (2) Å, c = 9.738 (4) Å, α = 104.07 (4)°, β = 98.09 (6)°, γ = 98.80 (2)°, unit-cell volume V = 299.6 Å3<>, Z = 1, and space group P − 1]. All lines were indexed. The d-values were calculated using CuK α1 radiation (λ = 1.5406 Å).