Self-organising radio systems have been proposed for aeronautical and maritime communication, navigation and surveillance applications. In aviation, the introduction of the VHF Data Link (VDL) Mode 4 is currently being discussed, while the implementation of Automatic Identification Systems (AIS) is planned in the maritime domain. Operating in an autonomous mode, a self-organising radio system employing Time Division Multiple Access (TDMA) does not require a terrestrial infrastructure, such as base stations. The concept of self-organisation is based on the cooperative behaviour of a large number of users sharing a common VHF radio channel. Analyses have shown that uncoordinated stations, so-called hidden users, can cause interference in self-organising radio systems. This paper presents two different approaches to autonomous self-organisation together with the results of investigations of intra-system interference. Such analyses may help to introduce potential improvements to the system performance, which reduce the effect of hidden users in this very promising GNSS-based technology.